ǂA ǂset of SNPs enabling identification of trouts and their hybrids in Salmo genus

Gašper Pustovrh (Author), Aleš Snoj (Author), Simona Sušnik Bajec (Author)

Abstract

We present a set of nuclear DNA SNPs enabling discrimination between Salmo marmoratus, S. obtusirostris and different evolutionary lineages of S. trutta. The loci containing SNPs were either isolated from marble trout nuclear DNA or inferred from literature. By comparing the joint sequences (ca. 5,830 bp) among 48 tested individuals, 127 substitutions and 8 indels were found. Forty-one of them, distributed across 16 loci, turned out as species orlineages specific. This set of SNP markers may be applied as molecular tool for genetic management purposes as well as in revolving phylogenetic and taxonomic uncertainties of different trout stocks.

Keywords

ribe;Salmonidae;postrvi;molekularna genetika;nuklearna DNK;molekularni markerji;

Data

Language:	English
Year of publishing:	2011
Typology:	1.01 - Original Scientific Article
Organization:	UL BF - Biotechnical Faculty
UDC:	597.2/.5:575
COBISS:	2741640
ISSN:	Y506-3825
Views:	865
Downloads:	255
Average score:	0 (0 votes)
Metadata:

Other data

Secondary language:	Unknown
Type (COBISS):	Not categorized
Pages:	str. 147-150
Volume:	ǂVol. ǂ3
Issue:	ǂno. ǂ1
Chronology:	2011
DOI:	10.1007/s12686-010-9310-6
ID:	1033734