results of a large-scale metabarcoding survey in the Alpine region
Nico Salmaso (Avtor), Serena Bernabei (Avtor), Adriano Boscaini (Avtor), Camilla Capelli (Avtor), Leonardo Cerasino (Avtor), Isabelle Domaizon (Avtor), Tina Eleršek (Avtor), Claudia Greco (Avtor), Aleksandra Krivograd-Klemenčič (Avtor), Paolo Tomassetti (Avtor), Rainer Kurmayer (Avtor)

Povzetek

In this work, we characterised the cyanobacterial communities in the plankton and littoral biofilm of 38 lakes and in the biofilm of 21 rivers in the Alps and surrounding subalpine regions by 16S rRNA gene metabarcoding. We found little overlap in the distribution of amplicon sequence variants (ASVs) between the three habitats and between water bodies. The differences were caused by environmental filtering acting on the selection of the most abundant ASVs and a high contribution of rare oligotypes. The differentiation of community and genotype composition from specific water bodies was explained to a significant extent by environmental variables and morphometry. The taxonomic consistency of ASVs classified under the same genus name was assessed by phylogenetic analyses performed on three representative dominant genera, namely Cyanobium, Tychonema and Planktothrix. The analyses revealed eco-evolutionary adaptations in lakes and rivers, including some evidence for a polyphyletic nature. Monitoring individual genotypes in relation to environmental conditions will be useful to define the ecological amplitude of these taxa. However, the persistence or ephemeral nature of some of the rarest and most unusual ASVs has remained unknown.

Ključne besede

plankton;littoral;bioflm;European Alps;phylogenetic analysis;toxigenic cyanobacteria;

Podatki

Jezik: Angleški jezik
Leto izida:
Tipologija: 1.01 - Izvirni znanstveni članek
Organizacija: NIB - Nacionalni inštitut za biologijo
UDK: 574
COBISS: 178197507 Povezava se bo odprla v novem oknu
ISSN: 0018-8158
Št. ogledov: 52
Št. prenosov: 14
Ocena: 0 (0 glasov)
Metapodatki: JSON JSON-RDF JSON-LD TURTLE N-TRIPLES XML RDFA MICRODATA DC-XML DC-RDF RDF

Ostali podatki

Sekundarni jezik: Slovenski jezik
Sekundarne ključne besede: površinske vode;plankton;ekologija;filogenija;cianobakterije;biodiverziteta;
Komentar vira: Soavtorji: Serena Bernabei, Adriano Boscaini, Camilla Capelli, Leonardo Cerasino, Isabelle Domaizon, Tina Elersek, Claudia Greco, Aleksandra Krivograd Klemenčič, Paolo Tomassetti & Rainer Kurmayer; Članek v PDF formatu obsega 28 str.; Online first: 12 December 2023;
DOI: 10.1007/s10750-023-05423-z
ID: 24531086