P. Boccacci (Avtor), Maria Aramini (Avtor), Matthew Ordidge (Avtor), Theo J. L. van Hintum (Avtor), Daniela Torello Marinoni (Avtor), N. Valentini (Avtor), Jean-Paul Sarraquigne (Avtor), Anita Solar (Avtor), M. Rovira (Avtor), L. Bacchetta (Avtor), R. Botta (Avtor)

Povzetek

Hazelnut (Corylus avellana L.) is one of the most important tree nut crops in Europe. Germplasm accessions are conserved in ex situ repositories, located in countries where hazelnut production occurs. In this work, we used ten simple sequence repeat (SSR) markers as the basis to establish a core collection representative of the hazelnut genetic diversity conserved in different European collections. A total of 480 accessions were used: 430 from ex situ collections and 50 landraces maintained on-farm. SSR analysis identified 181 genotypes, that represented our whole hazelnut germplasm collection (WHGC). Four approaches (utilizing MSTRAT, Power Core, and Core Hunter%s single- and multi-strategy) based on the maximization (M) strategy were used to determine the best sampling method. Core Hunter%s multi-strategy, optimizing both allele coverage (Cv) and Cavalli-Sforza and Edwards (Dce) distance with equal weight, outperformed the others and was selected as the best approach. The final core collection (Cv-Dce30) comprised 30 entries (16.6% of genotypes). It recovered all SSR alleles and preserved parameter variations when compared to WHGC. Entries represented all six gene pools obtained from the population structure analysis of WHGC, further confirming the representativeness of Cv-Dce30. Our findings contribute towards improving the conservation and management of European hazelnut genetic resources and could be used to optimize future research by identifying a minimum number of accessions on which to focus.

Ključne besede

leska;corylus avellana;genska banka;mikrosatelitski markerji;genotipi;hazelnut;plant genetic resources;germplasm management;SSR markers;microsatellites;germplasm repositories;in situ conservation;ex situ conservation;

Podatki

Jezik: Angleški jezik
Leto izida:
Tipologija: 1.01 - Izvirni znanstveni članek
Organizacija: UL BF - Biotehniška fakulteta
UDK: 634.5
COBISS: 86288899 Povezava se bo odprla v novem oknu
ISSN: 1614-2942
Št. ogledov: 159
Št. prenosov: 102
Ocena: 0 (0 glasov)
Metapodatki: JSON JSON-RDF JSON-LD TURTLE N-TRIPLES XML RDFA MICRODATA DC-XML DC-RDF RDF

Ostali podatki

Sekundarni jezik: Slovenski jezik
Sekundarne ključne besede: leska;corylus avellana;genska banka;mikrosatelitski markerji;genotipi;
Strani: str. 1-14 (48)
Letnik: ǂVol. ǂ17
Zvezek: ǂIss. ǂ6
Čas izdaje: 2021
DOI: 10.1007/s11295-021-01526-7
ID: 14031654