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Št. zadetkov: 3
Recombination drives evolution of the Clostridium difficile 16S-23S rRNA intergenic spacer region
Sandra Janežič, Alexander Indra, Thomas Rattei, Thomas Weinmaier, Maja Rupnik
Izvirni znanstveni članek
Oznake: clostridium difficile;sequence analysis;ribosomal RNS;
PCR-ribotyping, a typing method based on size variation in 16S-23S rRNA intergenic spacer region (ISR), has been used widely for molecular epidemiological investigations of C. difficile infections. In the present study, we describe the sequence diversity of ISRs from 43 C. difficile strains, represe ...
Leto: 2014 Vir: Medicinska fakulteta (UM MF)
Sequence similarity of Clostridium difficile strains by analysis of conserved genes and genome content is reflected by their ribotype affiliation
Hedwig Kurka, Armin Ehrenreich, Wolfgang Ludwig, Marc Monot, Maja Rupnik, Frédéric Barbut, Alexander Indra, Bruno Dupuy, Wolfgang Liebl
Izvirni znanstveni članek
Oznake: clostridium difficile;comparative genomics;RNA polymerase;
PCR-ribotyping is a broadly used method for the classification of isolates of Clostridium difficile, an emerging intestinal pathogen, causing infections with increased disease severity and incidence in several European and North American countries. We have now carried out clustering analysis with se ...
Leto: 2014 Vir: Medicinska fakulteta (UM MF)
International Clostridium difficile animal strain collection and large diversity of animal associated strains
Sandra Janežič, Valerija Zidarič, Bart Pardon, Alexander Indra, Branko Kokotovic, Jose Luis Blanco, Christian Seyboldt, Rodriguez Diaz, Ian Poxton, Vincent Perreten, Ilenia Drigo, Alena Jiraskova, Matjaž Ocepek, J.Scott Weese, Glenn Songer, Mark Wilcox, Maja Rupnik
Izvirni znanstveni članek
Oznake: Clostridium difficile;animals;ribotyping;geographic distribution;strain collection;
Background: Clostridium difficile is an important cause of intestinal infections in some animal species and animals might be a reservoir for community associated human infections. Here we describe a collection of animal associated C. difficile strains from 12 countries based on inclusion criteria of ...
Leto: 2014 Vir: Repozitorij Univerze v Ljubljani (RUL)
Št. zadetkov: 3
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