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Št. zadetkov: 2
Looking beyond virus detection in RNA sequencing data
Annelies Haegeman, Yoika Foucart, Kris De Jonghe, Thomas Goedefroit, Maher Al Rwahnih, Neil Boonham, Thierry Candresse, Yahya Gaafar, Oscar Hurtado-Gonzales, Zala Kogej, Denis Kutnjak, Janja Lamovšek, Irena Mavrič Pleško
Izvirni znanstveni članek
Oznake: rastlinski patogeni;diagnostika;sekvenciranje;metagenomika;metatranskriptomatika;plant viruses;plant virus detection;plant virology;high-throughput sequencing;RNA sequencing;plant tissues;plant pathogen;diagnostics;metagenomics;metatranscriptomics;
High-throughput sequencing (HTS), more specifically RNA sequencing of plant tissues, has become an indispensable tool for plant virologists to detect and identify plant viruses. During the data analysis step, plant virologists typically compare the obtained sequences to reference virus databases. In ...
Leto: 2023 Vir: Nacionalni inštitut za biologijo (NIB)
ǂA ǂprimer on the analysis of high-throughput sequencing data for detection of plant viruses
Denis Kutnjak, Lucie Tamisier, Ian Adams, Neil Boonham, Thierry Candresse, Michela Chiumenti, Kris De Jonghe, Jan F. Kreuze, Marie Lefebvre, Goncalo Silva, Martha Malapi-Wight, Paolo Margaria, Irena Mavrič Pleško, Sam McGreig, Laura Miozzi, Benoit Remenant, Jean-Sébastien Reynard, Johan Rollin, Mike Rott, Olivier Schumpp, Sébastien Massart, Annelies Haegeman
Pregledni znanstveni članek
Oznake: varstvo rastlin;rastlinski virus;bioinformatika;mikroorganizmi;zaznavanje;odkritje;plant virus;high-throughput sequencing;bioinformatics;detection;discovery;
High-throughput sequencing (HTS) technologies have become indispensable tools assisting plant virus diagnostics and research thanks to their ability to detect any plant virus in a sample without prior knowledge. As HTS technologies are heavily relying on bioinformatics analysis of the huge amount of ...
Leto: 2021 Vir: Nacionalni inštitut za biologijo (NIB)
Št. zadetkov: 2
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