Št. zadetkov: 58
Predavanje na tuji univerzi
Oznake:
IDP;protein folding;phase diagram;
In spin models, that are applied to describe the conformational transitions in polymers, the number of spin orientations, that correspond to the disordered conformation, can be estimated using fundamental definitions of Statistical Physics. For instance, when considering alpha-helix to coil transiti ...
Leto:
2016
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)
Predavanje na tuji univerzi
Oznake:
Biophysics;protein folding;helix-coil transition;spin models;
Biophysics is the area of research, devoted to the studies of physical problems related to living systems. Animal cell is the smallest unit of an organism and mainly contains water solutions of structurally inhomogeneous polymers of biological origin: polypeptides (proteins) and polynucleotides (DNA ...
Leto:
2016
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)
Predavanje na tuji univerzi
Oznake:
Describing protein conformations with Potts spins: Hamiltonian foundations of Zimm-Bragg model in water
Leto:
2023
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)
Objavljeni povzetek znanstvenega prispevka na konferenci (vabljeno predavanje)
Oznake:
protein folding;Zimm-Bragg;protein-water interactions;
I will summarize past and current achievements in the field of spin model applications to protein conformations. Using classical Statistical Mechanics scheme and 1D many-body Hamiltonian, exact partition function can be estimated, giving access to the free energy, order parameter and specific heat. ...
Leto:
2023
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)
Diplomsko delo
Oznake:
Zimm-Bragg model;conformational transitions in biopolymers;cold denaturation;
Zimm-Bragg model is the simplest to describe the conformational transitions in biopolymers and is regularly used for preocessing the experimental data. We review the model and its Hamiltonian definition with the goal to introduce the interaction with water into the picture. We show how modified ZB m ...
Leto:
2016
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)
Objavljeni povzetek znanstvenega prispevka na konferenci
Oznake:
iopolymers;circular dichroism;Zimm-Bragg model;helix-coil transition;
During the past decade the experimental studies of biopolymer conformations have reached an
unprecedented level of detailization and allow to study single molecules in vivo [1]. Processing of
experimental data essentially relies on theoretical approaches to conformational transitions in
biopolyme ...
Leto:
2018
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)
Ni določena
Oznake:
least-square fit;non-linear regression;Levenberg-Marquardt algorithm;
Least-square fit
Leto:
2021
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)
Ni določena
Oznake:
probability theory;statistics;combinatorics;slot machine games;
Analysis of gambling slot machines
Leto:
2022
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)
Predavanje na tuji univerzi
Oznake:
helix-coil;chain length;helicity degree;heat capacity;
Analysis of CD and DSC protein folding data
Leto:
2022
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)
Objavljeni povzetek znanstvenega prispevka na konferenci
Oznake:
spin model;water;protein folding;
The presence of several distinct minima in nearest-neighbor potentials in polymers makes it possible
to describe polymer conformations in terms of discrete isomeric states, naturally leading to spin
language. Using this general approach, a decade ago we have suggested the Hamiltonian formulation
...
Leto:
2023
Vir:
Repozitorij Univerze v Novi Gorici (RUNG)