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Št. zadetkov: 3
GoMapMan
Živa Ramšak, Špela Baebler, Ana Rotter, Matej Korbar, Igor Mozetič, Björn Usadel, Kristina Gruden
Izvirni znanstveni članek
Oznake: genes;plants;
GoMapMan (http://www.gomapman.org) is an open web-accessible resource for gene functional annotations in the plant sciences. It was developed to facilitate improvement, consolidation and visualization of gene annotations across several plant species. GoMapMan is based on the MapMan ontology, organiz ...
Leto: 2014 Vir: Nacionalni inštitut za biologijo (NIB)
Haplotype-resolved genome assembly of the tetraploid potato cultivar Désirée
Tim Godec, Sebastian Beier, Natalia Yaneth Rodriguez-Granados, Rashmi Sasidharan, Lamis Abdelhakim, Markus Teige, Björn Usadel, Kristina Gruden, Marko Petek
Drugi članki ali sestavki
Oznake: cultivar Désirée;potato;functional genomics;genome assembly;annotation pipeline;DNA methylation;epigenetics;
Cultivar Désirée is an important model for potato functional genomics studies to assist breeding strategies. Here, we present a haplotype-resolved genome assembly of Désirée, achieved by assembling PacBio HiFi reads and Hi-C scaffolding, resulting in a high-contiguity chromosome-level assembly. We i ...
Leto: 2025 Vir: Nacionalni inštitut za biologijo (NIB)
MapMan4
Rainer Schwacke, Gabriel Y. Ponce-Soto, Kirsten Krause, Anthony M. Bolger, Borjana Arsova, Asis Hallab, Kristina Gruden, Mark Stitt, Marie E. Bolger, Björn Usadel
Izvirni znanstveni članek
Oznake: genome sequences;MapMan4;
Genome sequences from over 200 plant species have already been published, with this number expected to increase rapidly due to advances in sequencing technologies. Once a new genome has been assembled and the genes identified, the functional annotation of their putative translational products, prote ...
Leto: 2019 Vir: Nacionalni inštitut za biologijo (NIB)
Št. zadetkov: 3
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