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Št. zadetkov: 4
Next generation sequencing for detection and discovery of plant viruses and viroids
Anja Pecman, Denis Kutnjak, Ion Gutierrez-Aguirre, Ian Adams, Adrian Fox, Neil Boonham, Maja Ravnikar
Izvirni znanstveni članek
Oznake: next generation sequencing;small RNA;ribosomal RNA depleted total RNA;detection;plant viruses;plant viroids;
Next generation sequencing (NGS) technologies are becoming routinely employed in different fields of virus research. Different sequencing platforms and sample preparation approaches, in the laboratories worldwide, contributed to a revolution in detection and discovery of plant viruses and viroids. I ...
Leto: 2017 Vir: Nacionalni inštitut za biologijo (NIB)
High-throughput sequencing facilitates characterisation of a ʺforgottenʺ plant virus
Anja Pecman, Denis Kutnjak, Nataša Mehle, Magda Tušek-Žnidarič, Ion Gutierrez-Aguirre, Patricija Pirnat, Ian Adams, Neil Boonham, Maja Ravnikar
Izvirni znanstveni članek
Oznake: henbane mosaic virus;Tomato;high-throughput sequencing;host range analysis;phylogeny;Potyvirus;
High-throughput sequencing has dramatically broadened the possibilities for plant virus research and diagnostics, enabling discovery of new or obscure viruses, and virus strains and rapid sequencing of their genomes. In this research, we employed high-throughput sequencing to discover a new virus in ...
Leto: 2018 Vir: Nacionalni inštitut za biologijo (NIB)
Guidelines for the reliable use of high throughput sequencing technologies to detect plant pathogens and pests
Sébastien Massart, Ian Adams, Maher Al Rwahnih, Steve Baeyen, Guillaume J. Bilodeau, Arnaud G. Blouin, Neil Boonham, Thierry Candresse, Anne Chandellier, Kris De Jonghe, Denis Kutnjak, Nataša Mehle
Pregledni znanstveni članek
Oznake: bolezni rastlin;rastlinski virusi;rastlinski patogeni;rastlinski škodljivci;sekvenciranje;
High-throughput sequencing (HTS) technologies have the potential to become one of the most significant advances in molecular diagnostics. Their use by researchers to detect and characterize plant pathogens and pests has been growing steadily for more than a decade and they are now envisioned as a ro ...
Leto: 2022 Vir: Nacionalni inštitut za biologijo (NIB)
ǂA ǂprimer on the analysis of high-throughput sequencing data for detection of plant viruses
Denis Kutnjak, Lucie Tamisier, Ian Adams, Neil Boonham, Thierry Candresse, Michela Chiumenti, Kris De Jonghe, Jan F. Kreuze, Marie Lefebvre, Goncalo Silva, Martha Malapi-Wight, Paolo Margaria, Irena Mavrič Pleško, Sam McGreig, Laura Miozzi, Benoit Remenant, Jean-Sébastien Reynard, Johan Rollin, Mike Rott, Olivier Schumpp, Sébastien Massart, Annelies Haegeman
Pregledni znanstveni članek
Oznake: varstvo rastlin;rastlinski virus;bioinformatika;mikroorganizmi;zaznavanje;odkritje;plant virus;high-throughput sequencing;bioinformatics;detection;discovery;
High-throughput sequencing (HTS) technologies have become indispensable tools assisting plant virus diagnostics and research thanks to their ability to detect any plant virus in a sample without prior knowledge. As HTS technologies are heavily relying on bioinformatics analysis of the huge amount of ...
Leto: 2021 Vir: Nacionalni inštitut za biologijo (NIB)
Št. zadetkov: 4
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