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Št. zadetkov: 5
Načrtovani biomolekularni kondenzati na podlagi interakcij med gradniki ovitih vijačnic
Maruša Ramšak, Roman Jerala
Doktorska disertacija
Oznake: obvite vijačnice;tekočinska fazna separacija;biomolekularni kondenzati;sintetični kondenzati;
Tekočinska fazna separacija (ang. liquid-liquid phase separation, LLPS) predstavlja temeljni biofizikalni proces, pri katerem se homogena raztopina molekul spontano loči v dve ali več različnih tekočih faz, kjer je vsaka faza obogatena z različnimi komponentami. Ta pojav je ključnega pomena v kontek ...
Leto: 2024 Vir: Medicinska fakulteta (UL MF)
Programmable de novo designed coiled coil-mediated phase separation in mammalian cells
Maruša Ramšak, Dominique A. Ramirez, Loren E. Hough, Michael R. Shirts, Sara Vidmar, Kristina Eleršič, Gregor Anderluh, Roman Jerala
Izvirni znanstveni članek
Oznake: biokemija;biopolimeri;biološki procesi;celice;sesalci;simulacije;
Membraneless liquid compartments based on phase-separating biopolymers have been observed in diverse cell types and attributed to weak multivalent interactions predominantly based on intrinsically disordered domains. The design of liquid-liquid phase separated (LLPS) condensates based on de novo des ...
Leto: 2023 Vir: Medicinska fakulteta (UL MF)
Chloroplast vesiculation and induced chloroplast vesiculation and senescence-associated gene 12 expression during tomato flower pedicel abscission
Magda Tušek-Žnidarič, Maja Zagorščak, Živa Ramšak, Katja Stare, Marko Chersicola, Maruša Pompe Novak, Aleš Kladnik, Marina Dermastia
Izvirni znanstveni članek
Oznake: abscission;chloroplast vesiculation;CURT1A;CV-containing vesicle;senescence-associated vacuole;ethylene;gene expression;tomato flower pedicel;
Abscission is a tightly regulated process in which plants shed unnecessary, infected, damaged, or aging organs, as well as ripe fruits, through predetermined abscission zones in response to developmental, hormonal, and environmental signals. Despite its importance, the underlying mechanisms remain i ...
Leto: 2025 Vir: Nacionalni inštitut za biologijo (NIB)
New cross-talks between pathways involved in grapevine infection with ʼCandidatus Phytoplasma solaniʼ revealed by temporal network modelling
Blaž Škrlj, Maruša Pompe Novak, Günter Brader, Barbara Anžič, Živa Ramšak, Kristina Gruden, Jan Kralj, Aleš Kladnik, Nada Lavrač, Thomas Roitsch, Marina Dermastia
Izvirni znanstveni članek
Oznake: analiza omrežij;fitoplazme;počrnelost lesa;community detection;enrichment analysis;
Understanding temporal biological phenomena is a challenging task that can be approached using network analysis. Here, we explored whether network reconstruction can be used to better understand the temporal dynamics of bois noir, which is associated with ‘Candidatus Phytoplasma solani’, and is one ...
Leto: 2021 Vir: Repozitorij Univerze v Ljubljani (RUL)
Differential response of grapevine to Infection with ʼCandidatus Phytoplasma solaniʼ in early and late growing season through complex regulation of mRNA and small RNA transcriptomes
Marina Dermastia, Blaž Škrlj, Rebeka Strah, Barbara Anžič, Špela Tomaž, Maja Križnik, Christina Schönhuber, Monika Riedle-Bauer, Živa Ramšak, Marko Petek, Aleš Kladnik, Nada Lavrač, Kristina Gruden, Thomas Roitsch, Günter Brader, Maruša Pompe Novak
Izvirni znanstveni članek
Oznake: ʼCandidatus Phytoplasma solaniʼ;vinska trta;počrnelost lesa;RNA-Seq;sRNA-Seq;miRNA;phasiRNA;hormoni;interakcijska omrežja;
Bois noir is the most widespread phytoplasma grapevine disease in Europe. It is associated with ‘Candidatus Phytoplasma solani’, but molecular interactions between the causal pathogen and its host plant are not well understood. In this work, we combined the analysis of high-throughput RNA-Seq and sR ...
Leto: 2021 Vir: Repozitorij Univerze v Ljubljani (RUL)
Št. zadetkov: 5
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